🚀 go-pugleaf

Jesse,

It sounds like the bounding boxes are being reset when you create the
new versions of the EPS files. This sometimes may happen if there is
spurious "empty" elements in the Illustrator file. Try a select all to
see if there are any "empty" boxes well outside of the main graphic
area. If so, delete these and re-save the EPS.

An alternate route is to convert your original EPS files to PDFs
(simply distill the EPS files). If they are created to the same size
as the graphic, i.e. not a small graphic in the middle of a large
sheet, then you can use the PDF directly. If the graphic is small in a
larger sheet, then use the cropping tool in Acrobat and Save As EPS,
and that may also be a clue as to why the updated versions are being
placed offset in the anchored frame.