Article View: bionet.general
Article #29113New Access to GenBank Services!!!
From: Dave Kristofferson
Date: Tue, 26 Jun 1990 01:47
Date: Tue, 26 Jun 1990 01:47
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7151 bytes
Previously the GenBank On-line Service (GOS) user agreement restricted GOS account access to only one registered user, i.e., the person whose name was on the account. *********************************************************************** *** We are happy to announce that this restriction has been lifted! *** *********************************************************************** Those of you who have expressed an interest in obtaining a joint GOS account along with other users will be happy to know that this is now permissible. The only remaining usage restriction is that the person whose name is on the account bears the responsibility for the proper use of the account (e.g., making sure that network use regulations are followed). GOS prices remain as before although you can now spread the cost around over more users. If you would like an application packet, please send your regular mailing address (not your e-mail address!) to gos@genbank.bio.net. A description of GOS features follows. ---------------------------------------------------------------------- GenBank Online-line Service Features ------------------------------------ **** New Solbourne Computer A powerful 80 MIPS (million instructions per second) Solbourne superminicomputer will be used for all aspects of the new GenBank On-line service. A 1000 base query sequence can be compared against all of GenBank in about 12 minutes using the FASTA similarity searching program (see below). **** Daily Updates of the GenBank, GenPept, and EMBL Databases Users can now retrieve and search the latest GenBank and EMBL sequence entries. A database (GenPept) containing translations of all annotated open reading frames in GenBank is also available. "New" databases of recent GenBank, GenPept, and EMBL entries are updated daily with data supplied by Los Alamos National Laboratory and the EMBL. Both the IRX and FASTA programs search these new entries. **** Fast, Indexed, Annotation Search and Entry Retrieval The IRX software from the National Library of Medicine is used to provide fast retrieval of database entries by any combination of words within the entry annotations. Sequences identified by the program may then be downloaded using the Kermit protocol or saved to the user's directory. **** Similarity Searching Using FASTA All of the above databases may be searched using the FASTA program written by William Pearson. The TFASTA program which compares protein sequences to the nucleic acid databases in up to 6 reading frames by translating at runtime is also available. **** Electronic Communications and Bulletin Boards (Newsgroups) Users with accounts on the GenBank On-line Service computer can use its electronic mail facilities to communicate at no cost with colleagues worldwide. Access to the numerous USENET newsgroups is available. Questions on a wide variety of subjects can be posted for an international audience. Of primary interest for the GenBank community are the BIOSCI newsgroups which cover subjects such as laboratory methods, journal contents, protein analysis, NIH funding announcements, and biological software. **** Access to the IntelliGenetics Suite of Programs For an additional fee, Class II users will also have access to all of the IntelliGenetics Suite of molecular biology sequence analysis software and the databases which are distributed with that software. This software provides a comprehensive range of functionality and is described in a separate enclosure. **** Connection by Public Data Network or by Internet The GenBank On-line computer can be accessed by the Telenet Public Data Network using a modem and phone lines or, for users that have an account on a computer with access to the Internet, by interactive connection using the TELNET protocol. User Class Descriptions ----------------------- Two different classes of login accounts exist on the GenBank computer and are referred to as Class I and Class II accounts as described below. In addition certain services are provided at no charge for the community at large through either anonymous login to the GenBank computer or by electronic mail server. Both non-profit AND for-profit users may access the GenBank On-line Service. The same fee structure applies to both types of users (contact us as indicated below for details). >>>> Services available to Class I (basic) time-sharing accounts ** Private login account with 1 Mbyte disk space. ** Daily database updates. ** Unrestricted access to databases through the IRX program. ** Interactive and batch use of FASTA and TFASTA similarity search programs. ** Access to worldwide electronic mail communication and all USENET newsgroups including the 21 BIOSCI (bionet.*) newsgroups specializing in topics for molecular biologists. ** 61.5 connect hours of above services with extra time billed on an hourly basis. >>>> Services available to Class II time-sharing accounts ** All of the Class I services. ** Access to all IntelliGenetics Suite programs and databases. ** 50 connect hours of IntelliGenetics Suite program usage with extra time billed on an hourly basis. >>>> Services available at no cost **Limited 7 min. IRX sessions to download database entries.** To use this anonymous access, dial into Telenet and use "c genbank,genbank" with the Telenet password "4nigms" to connect to the GenBank computer. Then use the GenBank username "genbank" with the password "4nigms" to log into the public account. You will be placed into the IRX program automatically. Access is also possible by the Internet. "TELNET" to the computer "genbank.bio.net" and log in with the GenBank username and password given above. **FASTA similarity searching by electronic mail.** To get instructions for using the FASTA Server, send an e-mail message with the command "help" in the body of the message to the Internet address "search@genbank.bio.net". **Sequence retrieval by locus name or accession number through an electronic mail server.** Instructions are available by sending a message similar to the above to the address retrieve@genbank.bio.net. **Daily/Weekly updates of GenBank, GenPept, and EMBL by anonymous FTP.** For further information please call GenBank at 415-962-7364, send e-mail to gos@genbank.bio.net, or write us at GenBank On-line Service c/o IntelliGenetics, Inc. 700 E. El Camino Real Mountain View, CA 94040 U.S.A.
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X-Google-Language: ENGLISH,ASCII-7-bit X-Google-Thread: 1119a6,2fd903ca847a2473,start X-Google-Attributes: gid1119a6,public X-Google-ArrivalTime: 1990-06-26 06:07:25 PST Path: arc1-ca.pugleaf.net!gmdzi!unido!mcsun!uunet!bionet!GENBANK.BIO.NET!kristoff From: kristoff@GENBANK.BIO.NET (Dave Kristofferson) Newsgroups: bionet.general Subject: New Access to GenBank Services!!! Message-ID: <CMM.0.88.646364854.kristoff@genbank.bio.net> Date: 26 Jun 90 01:47:34 GMT Sender: kristoff@genbank.BIO.NET Lines: 150 Posted: Tue Jun 26 02:47:34 1990