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Article #6592RE: Query about long stretches of sequence identity
From: POSTMAST
Date: Fri, 27 Sep 1991 23:27
Date: Fri, 27 Sep 1991 23:27
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1694 bytes
In message <CMM.0.88.685908696.kristoff@genbank.bio.net> Dave Kristofferson
asked
> What is the longest stretch of sequence
> *identity,* not just similarity, known between the mouse and bovine
> versions of the same protein?
Dr. Winona Barker did a quick check of the sequences in PIR and found that the
longest stretch of known protein sequence identity between bovine and mouse is
probably beta Actin (ATRTC in the current release, ATMSB and ATBOB in the next
release). The sequences are probably identical for 375 residues. However, the
bovine sequence is not as well determined as the mouse sequence. The human and
mouse sequences are identical.
------------------------------------------------------------------------
Dr. John S. Garavelli
Database Coordinator
Protein Identification Resource
National Biomedical Research Foundation
Washington, DC 20007
POSTMASTER@GUNBRF.BITNET
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X-Google-Language: ENGLISH,ASCII-7-bit X-Google-Thread: 10a7a9,251186ca98aa5006 X-Google-Attributes: gid10a7a9,public X-Google-ArrivalTime: 1991-09-28 11:38:45 PST Path: arc1-ca.pugleaf.net!gmdzi!unido!fauern!ira.uka.de!sol.ctr.columbia.edu!spool.mu.edu!munnari.oz.au!uunet!sun-barr!ccut!s.u-tokyo!bionet!GUNBRF.BITNET!POSTMAST From: POSTMAST@GUNBRF.BITNET Newsgroups: bionet.molbio.evolution Subject: RE: Query about long stretches of sequence identity Message-ID: <9109272329.AA18151@genbank.bio.net> Date: 27 Sep 91 23:27:00 GMT Sender: daemon@genbank.bio.net Distribution: bionet Lines: 18