low bootstrap values

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1 total messages Started by Peng Wang Wed, 16 May 2012 15:49

#403

Author: Peng Wang
Date: Wed, 16 May 2012 15:49

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Hello,

I am doing phylogeny work on protein sequences. There are 23 sequences from
more than 10 dicot species.The problem is that bootstrap values for some
nodes are too low (less than 50/100). The sequences belong to the same gene
family. I tried different ways, such as deleting bad regions and trying on
different models and the problem is still there. Can I ask for suggestions
here?

Peng Wang, Postdoc
Department of Biochemistry
University of Nebraska-Lincoln
Lincoln NE 68588
Email: pwang521@gmail.com

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Hello,<div><br></div><div>I am doing phylogeny work on protein sequences. T=
here are 23 sequences from more than 10 dicot species.The problem is that b=
ootstrap values for some nodes are too low (less than 50/100). The sequence=
s belong to the same gene family. I tried different ways, such as deleting =
bad regions and trying on different models and the problem is still there. =
Can I ask for suggestions here?=A0</div>
<div><br></div><div>Peng Wang, Postdoc</div><div>Department of Biochemistry=
</div><div>University of Nebraska-Lincoln</div><div>Lincoln NE 68588</div><=
div>Email: <a href=3D"mailto:pwang521@gmail.com">pwang521@gmail.com</a></di=
v>

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