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Article #160Re: querying on square-brackets, []
From: Dave Matthews
Date: Wed, 14 Aug 2002 15:04
Date: Wed, 14 Aug 2002 15:04
26 lines
2580 bytes
2580 bytes
Hi jean, > please try the following 2 tests, i expect both of them to > complete immediatly > > test 1: > find sequence [AL505438.1] > > this should be fast because find not preceded by query > does the same as the acedb graphic main window top yellow box > that is a strict name search without interpretation Yes, less than 1 second. > test 2: > query find sequence IS "[AL505438.1]" > > this is the fully pedantic form of the query > the presence of IS forces evaluation of name matching This one takes 6-7 seconds. I also tried it on a class with only 2000 objects and then it was < 1 sec. - Dave ---
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X-Google-Language: ENGLISH,ASCII-7-bit X-Google-Thread: f6d40,3f8543bfeb0403ea X-Google-Attributes: gidf6d40,public X-Google-ArrivalTime: 2002-08-14 08:04:52 PST Path: arc1-ca.pugleaf.net!archiver1.google.com!news1.google.com!newsfeed.stanford.edu!bloom-beacon.mit.edu!hgmp.mrc.ac.uk!net.bio.net From: matthews@greengenes.cit.cornell.edu (Dave Matthews) Newsgroups: bionet.software.acedb Subject: Re: querying on square-brackets, [] Date: 14 Aug 2002 16:04:50 +0100 Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre Lines: 27 Sender: mod-ace@hgmp.mrc.ac.uk Approved: BIOSCI Approval Key <biosci-approval-key@net.bio.net> Message-ID: <200208141314.g7EDEtJ14340@greengenes.cit.cornell.edu> NNTP-Posting-Host: mercury.hgmp.mrc.ac.uk X-Trace: niobium.hgmp.mrc.ac.uk 1029337491 22746 193.62.192.80 (14 Aug 2002 15:04:51 GMT) X-Complaints-To: news@net.bio.net NNTP-Posting-Date: Wed, 14 Aug 2002 15:04:51 +0000 (UTC) X-Received: from localhost (localhost [127.0.0.1]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 470BE17B9B for <acedb@hgmp.mrc.ac.uk>; Wed, 14 Aug 2002 14:15:02 +0100 (BST) X-Received: from greengenes.cit.cornell.edu (greengenes.cit.cornell.edu [128.253.246.43]) by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id A763817C6D for <acedb@net.bio.net>; Wed, 14 Aug 2002 14:14:57 +0100 (BST) X-Received: (from matthews@localhost) by greengenes.cit.cornell.edu (8.11.6+Sun/8.11.6) id g7EDEtJ14340; Wed, 14 Aug 2002 09:14:55 -0400 (EDT) X-To: Jean Thierry-Mieg <mieg@ncbi.nlm.nih.gov> X-Cc: ACEDB newsgroup <acedb@net.bio.net>, matthews@greengenes.cit.cornell.edu X-Razor-id: aa138d3d42ed00b061070bef37edf7768a2ca637 X-Auth: PGPMoose V1.1 PGP bionet.software.acedb iQCVAwUAPVpxjqCIqsWvyF5FAQEnrAP/YoZHFpOCJBRyjVcKODQwXCeJGc161liC HwEyZ9shSTITVbiM/cwB2L1ON41HZWtYrpjwqYKCyuk30SR6jon9Nwm/tO9ZOrAY HrFY+SVPX/CrC5woAdG0h5JiBUCXUe9kgBzbUMPkEXb5tSnNd4nh0uJD28ODOyTQ e2D5h9CIfI4= =xWhI