Article View: bionet.software.acedb
Article #2774Re: Data entry for ACeDB models?
From: John L. McCarthy
Date: Thu, 05 May 1994 15:14
Date: Thu, 05 May 1994 15:14
38 lines
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2666 bytes
In article <2q9sut$f44@overload.lbl.gov>, bks@s27w007.pswfs.gov (Bradley K. Sherman) wrote: > In article <4MAY199411294718@rigel.tamu.edu> grl6732@rigel.tamu.edu (Gerard R. Lazo) writes: > >Has anyone written a simple program for entering data for various > >model data sets in ACeDB? > > Most of the work seems to be translations of existing sets rather > than straight data entry. I would bet that most of the curators > have developed various tools based on awk, sed and so forth. > > You might consider something like Filemaker Pro as an input tool > and then transferring the comma-separated text fields to your Unix > box for transformation into an ACE file. > > --bks > > -- > Bradley K. Sherman P.O. Box 245 > Computer Scientist Berkeley, CA, 94701 > Dendrome Project 510-559-6437 FAX: 510-559-6440 > Institute of Forest Genetics Internet: bks@s27w007.pswfs.gov -- Lawrence Berkeley Laboratory has a couple of nawk programs that assist with translation from tab (or other unique character) delimited fields to .ace format files and vice versa -- line2ace and ace2line. You can get them via anonymous ftp from genome.lbl.gov in the directory /pub/SWAP.SOFTWARE/ace2stuff/ If you need to input data "from scratch," you can combine these, as Brad suggests, with a user-friendly data entry tool like FileMaker Pro. +=====================================================================+ | John L. McCarthy. . | Internet:..JLMcCarthy@lbl.gov | | Computer Science R&D MS 50B-3238 | Bitnet: ...JLMCCARTHY@LBL | | Lawrence Berkeley Laboratory .| telephone: (510) 486-5307 | | 1 Cyclotron Road . | | | BERKELEY, CA 94720, U.S.A. . | FAX: (510) 486-4004 | +=====================================================================+
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X-Google-Language: ENGLISH,ASCII-7-bit X-Google-Thread: f6d40,220afa5feebabe0c X-Google-Attributes: gidf6d40,public X-Google-ArrivalTime: 1994-05-05 11:21:21 PST Path: arc1-ca.pugleaf.net!gmd.de!nntp.gmd.de!Germany.EU.net!EU.net!howland.reston.ans.net!agate!overload.lbl.gov!slavsing.lbl.gov!user From: jlmccarthy@lbl.gov (John L. McCarthy) Newsgroups: bionet.software.acedb Subject: Re: Data entry for ACeDB models? Followup-To: bionet.software.acedb Date: 5 May 1994 15:14:07 GMT Organization: Lawrence Berkeley Laboratory Lines: 38 Distribution: world Message-ID: <jlmccarthy-050594080928@slavsing.lbl.gov> References: <4MAY199411294718@rigel.tamu.edu> <2q9sut$f44@overload.lbl.gov> NNTP-Posting-Host: slavsing.lbl.gov