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Article #2774

Re: Data entry for ACeDB models?

#2774
From: John L. McCarthy
Date: Thu, 05 May 1994 15:14
38 lines
2666 bytes
In article <2q9sut$f44@overload.lbl.gov>, bks@s27w007.pswfs.gov (Bradley K.
Sherman) wrote:

> In article <4MAY199411294718@rigel.tamu.edu> grl6732@rigel.tamu.edu (Gerard R. Lazo) writes:
> >Has anyone written a simple program for entering data for various
> >model data sets in ACeDB?
> 
> Most of the work seems to be translations of existing sets rather
> than straight data entry.  I would bet that most of the curators
> have developed various tools based on awk, sed and so forth.
> 
> You might consider something like Filemaker Pro as an input tool
> and then transferring the comma-separated text fields to your Unix
> box for transformation into an ACE file.
> 
>     --bks
> 
> -- 
> Bradley K. Sherman               P.O. Box 245                    
> Computer Scientist               Berkeley, CA, 94701
> Dendrome Project                 510-559-6437 FAX: 510-559-6440  
> Institute of Forest Genetics     Internet: bks@s27w007.pswfs.gov
-- 
Lawrence Berkeley Laboratory has a couple of nawk programs 
that assist with translation from tab (or other unique character) delimited
fields to .ace format files and vice versa -- line2ace and ace2line.
You can get them via anonymous ftp from genome.lbl.gov in the directory
/pub/SWAP.SOFTWARE/ace2stuff/
If you need to input data "from scratch," you can combine these, as Brad
suggests, with a user-friendly data entry tool like FileMaker Pro.
 
+=====================================================================+
|  John L. McCarthy.               . | Internet:..JLMcCarthy@lbl.gov  |
|  Computer Science R&D  MS 50B-3238 | Bitnet: ...JLMCCARTHY@LBL      |
|  Lawrence Berkeley Laboratory     .| telephone: (510) 486-5307      |
|  1 Cyclotron Road                . |                                |
|  BERKELEY, CA 94720, U.S.A.      . | FAX:       (510) 486-4004      |
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From: jlmccarthy@lbl.gov (John L. McCarthy)
Newsgroups: bionet.software.acedb
Subject: Re: Data entry for ACeDB models?
Followup-To: bionet.software.acedb
Date: 5 May 1994 15:14:07 GMT
Organization: Lawrence Berkeley Laboratory
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