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Article #2896Re: ACeDB (from Geoff Hughes)
From: Gary Aochi
Date: Wed, 16 Jun 1993 00:31
Date: Wed, 16 Jun 1993 00:31
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2305 bytes
>In article <16359@news.duke.edu>, glh@bio3.acpub.duke.edu (Geoff Hughes) writes: > Here are a few questions that I have: > > How is query useful in an X environment? > > Geoff Hughes The query() function call, for those who are familiar with the source code, is one of the essential methods for sorting and manipulating data in the database. But, to address your question, I must admit to being puzzled by it. The fact that the external environment is X Windows does not necessarily have much to do with the query system inside ACEDB. If, perhaps, you mean that with BOLD text, you can hyper-browse and move your windows around (in X), yes that is possible. But by using carefully (and not so carefully (1)) constructed queries, you can easily construct useful data keysets of objects which interest you. For example, you could get all the papers written by Jean Thierry-Mieg in the year 1992 or, as another example, all the people who work at LBL and who have written exactly three papers which were accepted into a journal. Of course, these examples are rather useless and probably not at all applicable to the type of data in most genome databases, but I hope it gives you an idea of the potential that lies within the query system. (1) Having talked to Jean Thierry-Mieg recently, I was told that in most common cases, using the general text search box (on the main window of ACEDB) is faster than using a rather complex query command due to the order of evaluation of the general text search which can reduce the searched dataset faster than a complex and very specific query. I hope this helps Gary Aochi ghaochi@lbl.gov
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X-Google-Language: ENGLISH,ASCII-7-bit X-Google-Thread: f6d40,f8d0f41a2bba5de9 X-Google-Attributes: gidf6d40,public X-Google-ArrivalTime: 1993-06-15 17:33:30 PST Path: arc1-ca.pugleaf.net!gmd.de!newsserver.jvnc.net!howland.reston.ans.net!agate!overload.lbl.gov!gnu.lbl.gov!aochi From: aochi@gnu.lbl.gov (Gary Aochi) Newsgroups: bionet.software.acedb Subject: Re: ACeDB (from Geoff Hughes) Date: 16 Jun 1993 00:31:14 GMT Organization: Lawrence Berkeley Laboratory Lines: 37 Distribution: world Message-ID: <1vlpki$dpn@overload.lbl.gov> References: <16359@news.duke.edu> NNTP-Posting-Host: gnu.lbl.gov Keywords: query