replyto=3F7BE1C8.530C7F30@sanger.ac.uk&subject=Re: How to use embl2ace

Article View: bionet.software.acedb

Article #75

Back to bionet.software.acedb Previous Next

#75

From: Kate Gendall
Date: Tue, 14 Oct 2003 08:05

6 lines
2961 bytes

I have a file containing sequence data downloaded from Ensembl. Is there
a
way to convert this data into an ACeDB database? Using embl2ace (from the
ACeDB tools) or some other way? If I need to use embl2ace, I'm not really
sure where to begin. Thanks for your help.
---

Technical Details

Message-ID: <1066093323.3f8b4b0bd92df@www.studentmail.otago.ac.nz>

Path:

arc1-ca.pugleaf.net!archiver1.google.com!news2.google.com!news.maxwell.syr.edu!newsswitch.lcs.mit.edu!bloom-beacon.mit.edu!hgmp.mrc.ac.uk!net.bio.net

Show Full Headers

Complete Article Headers

X-Google-Language: ENGLISH,ASCII-7-bit
X-Google-Thread: f6d40,7fb7da8e89f4932b,start
X-Google-Attributes: gidf6d40,public
X-Google-ArrivalTime: 2003-10-14 01:05:54 PST
Path: arc1-ca.pugleaf.net!archiver1.google.com!news2.google.com!news.maxwell.syr.edu!newsswitch.lcs.mit.edu!bloom-beacon.mit.edu!hgmp.mrc.ac.uk!net.bio.net
From: genka513@student.otago.ac.nz (Kate Gendall)
Newsgroups: bionet.software.acedb
Subject: replyto=3F7BE1C8.530C7F30@sanger.ac.uk&subject=Re: How to use embl2ace
Date: 14 Oct 2003 09:05:52 +0100
Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre
Lines: 7
Sender: mod-ace@hgmp.mrc.ac.uk
Approved: BIOSCI Approval Key <biosci-approval-key@net.bio.net>
Message-ID: <1066093323.3f8b4b0bd92df@www.studentmail.otago.ac.nz>
NNTP-Posting-Host: mercury.hgmp.mrc.ac.uk
Mime-Version: 1.0
Content-Type: text/plain; charset=ISO-8859-1
Content-Transfer-Encoding: 8bit
X-Trace: niobium.hgmp.mrc.ac.uk 1066118753 25293 193.62.192.80 (14 Oct 2003 08:05:53 GMT)
X-Complaints-To: news@net.bio.net
NNTP-Posting-Date: Tue, 14 Oct 2003 08:05:53 +0000 (UTC)
X-Original-To: bionet-software-acedb@net.bio.net
X-Original-To: acedb@net.bio.net
X-Received: from localhost (localhost [127.0.0.1])
 by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 6DBB67D214
 for <acedb@net.bio.net>; Tue, 14 Oct 2003 01:49:38 +0100 (BST)
X-Received: from mailhub1.otago.ac.nz (mailhub1.otago.ac.nz [139.80.64.218])
 by mercury.hgmp.mrc.ac.uk (Postfix) with ESMTP id 1A06F7D11B
 for <acedb@net.bio.net>; Tue, 14 Oct 2003 01:49:35 +0100 (BST)
X-Received: (from root@localhost)
 by mailhub1.otago.ac.nz (8.12.9/8.12.9) id h9E0nWkV003705
 for acedb@net.bio.net; Tue, 14 Oct 2003 13:49:32 +1300
X-Received: from ungol.otago.ac.nz (ungol.otago.ac.nz [139.80.64.85])
 by mailhub1.otago.ac.nz (8.12.9/8.12.9) with ESMTP id h9E0nWfm003679
 for <acedb@net.bio.net>; Tue, 14 Oct 2003 13:49:32 +1300
X-Received: (from apache@localhost)
 by ungol.otago.ac.nz (8.11.6/8.11.6) id h9E123509800
 for acedb@net.bio.net; Tue, 14 Oct 2003 14:02:03 +1300
X-Received: from ou016240.otago.ac.nz (ou016240.otago.ac.nz [139.80.16.240]) 
 by www.studentmail.otago.ac.nz (IMP) with HTTP
 for <genka513@studentmail.otago.ac.nz>; Tue, 14 Oct 2003 14:02:03 +1300
X-To: acedb@net.bio.net
X-User-Agent: Internet Messaging Program (IMP) 3.2.2-cvs
X-Originating-IP: 139.80.16.240
X-scanner: scanned by Inflex 1.0.12.7
X-Auth: PGPMoose V1.1 PGP bionet.software.acedb
 iQCVAwUAP4uuX6CIqsWvyF5FAQEyPQQAoeA64Xg9ZQy6qU4zDp8Y1SdCTBchF57D
 jnR2s2GxNV9tDyG629pb/pFFCQPCx1iwYj93BtP+t9VyJLasVWzIl5mjaQNWK4DF
 CrW8XBJROZx1R60vAt21uZFvO2a+Ru/8tT1ZHGlVWDrCEH7IhsBXpkoiFB5ZHCoO
 xKh/K1eSvxI=
 =ydTo