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Article #264

Announcement: GenPept 134.0 available

#264
From: Gary Smythers
Date: Tue, 25 Feb 2003 20:07
176 lines
11504 bytes
     This is to announce the availability of release 134.0 of the GenPept(R) 
(GenBank Gene Products) Database.  GenPept is provided in a format similar 
to that formerly distributed by GenBank(R) under the administration of 
Intelligenetics Inc.  This GenPept release IS _NOT_ AN OFFICIAL RELEASE FROM 
THE NCBI-GENBANK, but an attempt to provide a data file format compatible 
with existing software products.  

This data format is suitable as an input data file for the GCG program
genbanktogcg -genpept.  Compatibility with other software has not been tested.

Site:      ftp.ncifcrf.gov

Directory: pub/genpept
Files:     gprel134.txt.Z, gpdat134.seq.Z

Directory: pub/genpept/divisions
Files: gpbct1.seq.Z,  gpbct2.seq.Z,  gpbct3.seq.Z,  gpbct4.seq.Z,
       gpbct5.seq.Z,  gpbct6.seq.Z, 
       gpest1.seq.Z,  gpest2.seq.Z,  gpest3.seq.Z,  gpest4.seq.Z, 
       gpest5.seq.Z,  gpest6.seq.Z,  gpest7.seq.Z,  gpest8.seq.Z,  
       gpest9.seq.Z,  gpest10.seq.Z, gpest11.seq.Z, gpest12.seq.Z, 
       gpest13.seq.Z, gpest14.seq.Z, gpest15.seq.Z, gpest16.seq.Z, 
       gpest17.seq.Z, gpest18.seq.Z, gpest19.seq.Z, gpest20.seq.Z, 
       gpest21.seq.Z, gpest22.seq.Z, gpest23.seq.Z, gpest24.seq.Z, 
       gpest25.seq.Z, gpest26.seq.Z, gpest27.seq.Z, gpest28.seq.Z, 
       gpest29.seq.Z, gpest30.seq.Z, gpest31.seq.Z, gpest32.seq.Z, 
       gpest33.seq.Z, gpest34.seq.Z, gpest35.seq.Z, gpest36.seq.Z, 
       gpest37.seq.Z, gpest38.seq.Z, gpest39.seq.Z, gpest40.seq.Z,
       gpest41.seq.Z, gpest42.seq.Z, gpest43.seq.Z, gpest44.seq.Z,
       gpest45.seq.Z, gpest46.seq.Z, gpest47.seq.Z, gpest49.seq.Z,
       gpest50.seq.Z, gpest51.seq.Z, gpest52.seq.Z, gpest53.seq.Z,
       gpest54.seq.Z, gpest55.seq.Z, gpest56.seq.Z, gpest57.seq.Z,
       gpest58.seq.Z, gpest59.seq.Z, gpest60.seq.Z, gpest61.seq.Z,
       gpest62.seq.Z, gpest63.seq.Z, gpest64.seq.Z, gpest65.seq.Z,
       gpest66.seq.Z, gpest67.seq.Z, gpest68.seq.Z, gpest69.seq.Z,
       gpest70.seq.Z, gpest71.seq.Z, gpest72.seq.Z, gpest73.seq.Z,
       gpest74.seq.Z, gpest75.seq.Z, gpest76.seq.Z, gpest77.seq.Z,
       gpest78.seq.Z, gpest79.seq.Z, gpest80.seq.Z, gpest81.seq.Z,
       gpest82.seq.Z, gpest83.seq.Z, gpest84.seq.Z, gpest85.seq.Z,
       gpest86.seq.Z, gpest87.seq.Z, gpest88.seq.Z, gpest89.seq.Z,
       gpest90.seq.Z, gpest91.seq.Z, gpest92.seq.Z, gpest93.seq.Z,
       gpest94.seq.Z, gpest95.seq.Z, gpest96.seq.Z, gpest97.seq.Z,
       gpest98.seq.Z, gpest99.seq.Z, gpest100.seq.Z, gpest101.seq.Z,
       gpest102.seq.Z, gpest103.seq.Z, gpest104.seq.Z, gpest105.seq.Z,
       gpest106.seq.Z, gpest107.seq.Z, gpest108.seq.Z, gpest109.seq.Z,
       gpest110.seq.Z, gpest111.seq.Z, gpest112.seq.Z, gpest113.seq.Z,
       gpest114.seq.Z, gpest115.seq.Z, gpest116.seq.Z, gpest117.seq.Z,
       gpest118.seq.Z, gpest119.seq.Z, gpest120.seq.Z, gpest121.seq.Z,
       gpest122.seq.Z, gpest123.seq.Z, gpest124.seq.Z, gpest125.seq.Z,
       gpest126.seq.Z, gpest127.seq.Z, gpest128.seq.Z, gpest129.seq.Z,
       gpest130.seq.Z, gpest131.seq.Z, gpest132.seq.Z, gpest133.seq.Z,
       gpest134.seq.Z, gpest135.seq.Z, gpest136.seq.Z, gpest137.seq.Z,
       gpest138.seq.Z, gpest139.seq.Z, gpest140.seq.Z, gpest141.seq.Z,
       gpest142.seq.Z, gpest143.seq.Z, gpest144.seq.Z, gpest145.seq.Z,
       gpest146.seq.Z, gpest147.seq.Z, gpest148.seq.Z, gpest149.seq.Z,
       gpest150.seq.Z, gpest151.seq.Z, gpest152.seq.Z, gpest153.seq.Z,
       gpest154.seq.Z, gpest155.seq.Z, gpest156.seq.Z, gpest157.seq.Z,
       gpest158.seq.Z, gpest159.seq.Z, gpest160.seq.Z, gpest161.seq.Z,
       gpest162.seq.Z, gpest163.seq.Z, gpest164.seq.Z, gpest165.seq.Z,
       gpest166.seq.Z, gpest167.seq.Z, gpest168.seq.Z, gpest169.seq.Z,
       gpest170.seq.Z, gpest171.seq.Z, gpest172.seq.Z, gpest173.seq.Z,
       gpest174.seq.Z, gpest175.seq.Z, gpest176.seq.Z, gpest177.seq.Z,
       gpest178.seq.Z, gpest179.seq.Z, gpest180.seq.Z, gpest181.seq.Z,
       gpest182.seq.Z, gpest183.seq.Z, gpest184.seq.Z, gpest185.seq.Z,
       gpest186.seq.Z, gpest187.seq.Z, gpest188.seq.Z, gpest189.seq.Z,
       gpest190.seq.Z, gpest191.seq.Z, gpest192.seq.Z, gpest193.seq.Z,
       gpest194.seq.Z, gpest195.seq.Z, gpest196.seq.Z, gpest197.seq.Z,
       gpest198.seq.Z, gpest199.seq.Z, gpest200.seq.Z, gpest201.seq.Z,
       gpest202.seq.Z, gpest203.seq.Z, gpest204.seq.Z, gpest205.seq.Z,
       gpest206.seq.Z, gpest207.seq.Z, gpest208.seq.Z, gpest209.seq.Z,
       gpest210.seq.Z, gpest211.seq.Z, gpest212.seq.Z, gpest213.seq.Z,
       gpest214.seq.Z, gpest215.seq.Z, gpest216.seq.Z, gpest217.seq.Z,
       gpest218.seq.Z, gpest219.seq.Z, gpest220.seq.Z, gpest221.seq.Z,
       gpest222.seq.Z, gpest223.seq.Z, gpest224.seq.Z, gpest225.seq.Z,
       gpest226.seq.Z, gpest227.seq.Z, gpest228.seq.Z, gpest229.seq.Z,
       gpest230.seq.Z, gpest231.seq.Z, gpest232.seq.Z, gpest233.seq.Z,
       gpest234.seq.Z, gpest235.seq.Z, gpest236.seq.Z, gpest237.seq.Z,
       gpest238.seq.Z, gpest239.seq.Z, gpest240.seq.Z,
       gpgss1.seq.Z,  gpgss2.seq.Z,  gpgss3.seq.Z,  gpgss4.seq.Z, 
       gpgss4.seq.Z,  gpgss6.seq.Z,  gpgss7.seq.Z,  gpgss8.seq.Z,  
       gpgss9.seq.Z,  gpgss10.seq.Z, gpgss11.seq.Z, gpgss12.seq.Z,
       gpgss13.seq.Z, gpgss14.seq.Z, gpgss15.seq.Z, gpgss16.seq.Z,
       gpgss17.seq.Z, gpgss18.seq.Z, gpgss19.seq.Z, gpgss20.seq.Z,
       gpgss21.seq.Z, gpgss22.seq.Z, gpgss23.seq.Z, gpgss24.seq.Z,
       gpgss25.seq.Z, gpgss26.seq.Z, gpgss27.seq.Z, gpgss28.seq.Z,
       gpgss29.seq.Z, gpgss30.seq.Z, gpgss31.seq.Z, gpgss32.seq.Z,
       gpgss33.seq.Z, gpgss34.seq.Z, gpgss35.seq.Z, gpgss36.seq.Z,
       gpgss37.seq.Z, gpgss38.seq.Z, gpgss39.seq.Z, gpgss40.seq.Z,
       gpgss41.seq.Z, gpgss42.seq.Z, gpgss43.seq.Z, gpgss44.seq.Z,
       gpgss45.seq.Z, gpgss46.seq.Z, gpgss47.seq.Z, gpgss48.seq.Z,
       gpgss49.seq.Z, gpgss50.seq.Z, gpgss51.seq.Z, gpgss52.seq.Z,
       gpgss53.seq.Z, gpgss54.seq.Z, gpgss55.seq.Z, gpgss56.seq.Z,
       gpgss57.seq.Z, gpgss58.seq.Z, gpgss59.seq.Z, gpgss60.seq.Z,
       gpgss61.seq.Z, gpgss62.seq.Z, gpgss63.seq.Z, gpgss64.seq.Z,
       gpgss65.seq.Z, gpgss66.seq.Z,
       gphtc1.seq.Z,  gphtc2.seq.Z,  gphtc3.seq.Z,  gphtc4.seq.Z,
       gphtg1.seq.Z,  gphtg2.seq.Z,  gphtg3.seq.Z,  gphtg4.seq.Z,
       gphtg5.seq.Z,  gphtg6.seq.Z,  gphtg7.seq.Z,  gphtg8.seq.Z,
       gphtg9.seq.Z,  gphtg10.seq.Z, gphtg11.seq.Z, gphtg12.seq.Z,
       gphtg13.seq.Z, gphtg14.seq.Z, gphtg15.seq.Z, gphtg16.seq.Z,
       gphtg17.seq.Z, gphtg18.seq.Z, gphtg19.seq.Z, gphtg20.seq.Z,
       gphtg21.seq.Z, gphtg22.seq.Z, gphtg23.seq.Z, gphtg24.seq.Z,
       gphtg25.seq.Z, gphtg26.seq.Z, gphtg27.seq.Z, gphtg28.seq.Z,
       gphtg29.seq.Z, gphtg30.seq.Z, gphtg31.seq.Z, gphtg32.seq.Z,
       gphtg33.seq.Z, gphtg34.seq.Z, gphtg35.seq.Z, gphtg36.seq.Z,
       gphtg37.seq.Z, gphtg38.seq.Z, gphtg39.seq.Z, gphtg40.seq.Z,
       gphtg41.seq.Z, gphtg42.seq.Z, gphtg43.seq.Z, gphtg44.seq.Z,
       gphtg45.seq.Z, gphtg46.seq.Z, gphtg47.seq.Z, gphtg48.seq.Z,
       gphtg49.seq.Z, gphtg50.seq.Z, gphtg51.seq.Z, gphtg52.seq.Z,
       gphtg53.seq.Z, gphtg54.seq.Z, gphtg55.seq.Z, gphtg56.seq.Z,
       gphtg57.seq.Z, gphtg58.seq.Z,
       gpinv1.seq.Z,  gpinv2.seq.Z,  gpinv3.seq.Z,  gpinv4.seq.Z,
       gpinv5.seq.Z
       gpmam.seq.Z,
       gppat1.seq.Z,  gppat2.seq.Z,  gppat3.seq.Z,  gppat4.seq.Z
       gppat5.seq.Z,  gppat6.seq.Z,  gppat7.seq.Z,  gpphg.seq.Z,   
       gppln1.seq.Z,  gppln2.seq.Z,  gppln3.seq.Z,  gppln4.seq.Z,
       gppln5.seq.Z,  gppln6.seq.Z,  gppln7.seq.Z,
       gppri1.seq.Z,  gppri2.seq.Z,  gppri3.seq.Z,  gppri4.seq.Z,
       gppri5.seq.Z,  gppri6.seq.Z,  gppri7.seq.Z,  gppri8.seq.Z,
       gppri9.seq.Z,  gppri10.seq.Z, gppri11.seq.Z, gppri12.seq.Z,
       gppri13.seq.Z, gppri14.seq.Z, gppri15.seq.Z, gppri16.seq.Z,
       gppri17.seq.Z, gppri18.seq.Z, gppri19.seq.Z, gppri20.seq.Z,
       gppri21.seq.Z, gppri22.seq.Z, gppri23.seq.Z, gppri24.seq.Z,
       gprod1.seq.Z,  gprod2.seq.Z,  gprod3.seq.Z,  gprod4.seq.Z,
       gprod5.seq.Z,  gprod6.seq.Z,
       gpsts1.seq.Z,  gpsts2.seq.Z,  
       gpsyn.seq.Z,
       gpuna.seq.Z,   gpvrl1.seq.Z,  gpvrl2.seq.Z,  gpvrl3.seq.Z,
       gpvrt1.seq.Z   gpvrt2.seq.Z

Directory: pub/genpept/updates  (daily, cumulative)
Files:     gpseq_updates.dat.Z

Rel. Date: 25-Feb-2003

Ftp mirror sites have been provided through the kind generosity of the 
following institutions:

   C.D. Nager (nager@fmi.ch), at the Freidrich Miescher Institute maintains:

   Name:       ftp.ecbi.org
   Address:    147.167.128.40
   Directory:  ncifcrf

   Dr Jaime Prilusky (lsprilus@weizmann.weizmann.ac.il), at the Weizmann 
   Institute of Science maintains:

   Name:       bioinformatics.weizmann.ac.il
   Address:    132.76.55.12
   Directory:  /pub/databases/genpept 

We greatly appreciate their efforts in creating multiple points of access, and
reducing the load on our systems.

If you have questions or comments concerning this data, or you experience any
difficulty in downloading the data via ftp, please contact:

Gary Smythers  gws@ncifcrf.gov  301-846-5778
  or
Bob Stephens  bobs@ncifcrf.gov  301-846-5787

# -----------------------------------------------------------------
# | Gary W. Smythers                     | email: gws@ncifcrf.gov |
# | Programmer Analyst IV                |                        |
# | Advanced Biomedical Computing Center | Phone: (301) 846-5778  |
# | SAIC NCI-Frederick                   | FAX:   (301) 846-5762  |
# | PO Box B, Bldg 430                   |                        |
# | Frederick, MD 21702-1201   USA       |                        |
# -----------------------------------------------------------------
===============================================================================
GenPept (R) and GenBank (R) are registered trademarks of the U.S. Department of 
Health and Human Services for the GenBank Gene Products and the GenBank Genetic
Sequence Data Banks.
---
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From: gws@ncifcrf.gov (Gary Smythers)
Newsgroups: bionet.software.gcg
Subject: Announcement: GenPept 134.0 available
Date: 25 Feb 2003 20:07:01 -0000
Organization: BIOSCI/MRC Human Genome Mapping Project Resource Centre
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