🚀 go-pugleaf

RetroBBS NetNews Server

Inspired by RockSolid Light RIP Retro Guy

Article View: bionet.software.srs
Article #29

Icarus script for stockholm format Pfam anyone ?

#29
From: Thon de Boer
Date: Tue, 05 Oct 1999 00:00
17 lines
1212 bytes
Hi,

Has anyone made a new icarus .is script for the new stockholm format 
of the Pfam database by any chance ?

The convert script that strips out the stockholm format chokes on the 
new 4.3 release and I can't seems to find an icarus script on the 
sanger-home-of-Pfam-center either.

If they don't support the new stockholm format....who does ! ;-)

So before I try to write a new parser myself I thought I try this 
first....

Thanks
Thon de Boer,
HGMP
Technical Details
Message-ID: <19991005.10401800@lutetium.hgmp.mrc.ac.uk>
Path: arc1-ca.pugleaf.net!unknown!not-for-mail

Show Full Headers
Complete Article Headers
X-Google-Language: ENGLISH,ASCII-7-bit
X-Google-Thread: fa6ec,f69b3a8d9b22281c,start
X-Google-Attributes: gidfa6ec,public
From: Thon de Boer <tdeboer@hgmp.mrc.ac.uk>
Subject: Icarus script for stockholm format Pfam anyone ?
Date: 1999/10/05
Message-ID: <19991005.10401800@lutetium.hgmp.mrc.ac.uk>
X-Deja-AN: 533004937
Content-Transfer-Encoding: quoted-printable
X-Trace: niobium.hgmp.mrc.ac.uk 939116491 15374 193.62.192.71 (5 Oct 1999 09:41:31 GMT)
Organization: MRC Human Genome Mapping Project Resource Centre
X-Priority: 3 (Normal)
Content-Type: text/plain; charset=ISO-8859-1
Mime-Version: 1.0
NNTP-Posting-Date: 5 Oct 1999 09:41:31 GMT
Newsgroups: bionet.software.srs
X-Complaints-To: news@hgmp.mrc.ac.uk