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Article #2317Re: DNA sequence editor
From: Peter Rice
Date: Thu, 09 Jul 2009 10:41
Date: Thu, 09 Jul 2009 10:41
29 lines
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2619 bytes
dawe wrote: > Astala Vista <rwmd1@NOSPAMle.ac.uk> wrote: > >> In common with many other sites, we are no longer providing GCG to our >> users as it is increasingly more difficult to support. However, we need >> a simple DNA sequence editor replacement for GCG SeqEd. >> >> We are running openSuSE 11.1. Any suggestions? I am interested in adding something to EMBOSS, but afraid of the effort involved if it needs significant further development. I spent 2 solid years inside GCG's SeqEd converting it into an EMBL/GenBank/SwissProt feature table editor for EGCG. > If you find any, please let me know. > Meanwhile you may try ApE: > > <http://www.biology.utah.edu/jorgensen/wayned/ape/> > > which is multiplatform Useful to see a plasmid editor. What is the license for ApE? regards, Peter Rice
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X-Google-Thread: 6710630482,a524f958f2ed3d5 X-Google-Attributes: gid6710630482,public,usenet X-Google-NewGroupId: yes X-Google-Language: ENGLISH,ASCII-7-bit Path: arc1-ca.pugleaf.net!g2news2.google.com!news2.google.com!npeer01.iad.highwinds-media.com!news.highwinds-media.com!feed-me.highwinds-media.com!nntp.club.cc.cmu.edu!usenet01.sei.cmu.edu!elk.ncren.net!news.purdue.edu!not-for-mail From: Peter Rice <pmr@ebi.ac.uk> Newsgroups: bionet.software Subject: Re: DNA sequence editor Date: Thu, 09 Jul 2009 11:41:16 +0100 Organization: European Bioinformatics Institute Lines: 30 Approved: BIOSCI Approval Key <biosci-approval-key@net.bio.net> Message-ID: <mailman.570.1247146503.21502.bio-soft@net.bio.net> References: <mailman.457.1245677105.21502.bio-soft@net.bio.net> <mailman.564.1247079620.21502.bio-soft@net.bio.net> NNTP-Posting-Host: kalo.bio.indiana.edu Mime-Version: 1.0 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: 7bit X-Trace: mailhub227.itcs.purdue.edu 1247146530 8437 129.79.224.26 (9 Jul 2009 13:35:30 GMT) X-Complaints-To: news@purdue.edu NNTP-Posting-Date: Thu, 9 Jul 2009 13:35:30 +0000 (UTC) Cc: bionet-software@moderators.isc.org To: dawe <me@adomain.no> X-Envelope-From: pmr@ebi.ac.uk User-Agent: Thunderbird 2.0.0.21 (X11/20090320) In-Reply-To: <mailman.564.1247079620.21502.bio-soft@net.bio.net> X-Enigmail-Version: 0.95.7 X-Mailman-Approved-At: Thu, 09 Jul 2009 08:35:00 -0500 X-BeenThere: bio-soft@net.bio.net X-Mailman-Version: 2.1.4 Precedence: list X-Auth: PGPMoose V1.1 PGP bionet.software iQCVAwUBSlXyB6CIqsWvyF5FAQFMIwQAiv6ADy7OppNlmCXZDKhlsu2MdxiInBKw wb+1q2kMQGojMYYYFfqYABuAN6MSrEthDCudeTjydleInQuSx+cKKtfpGDEl5b7t +kZL1Gxpl3i8wxE0aVheeLMTHGkpCr7MuZk1FrXb8OzhrYfN/h9j7Z7Itfofsp+X JS+piXzREvo= =7a5D