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Article #2344Converting Clustal alignment to a single consensus sequence
From: Duncan Clark
Date: Fri, 15 Jan 2010 16:50
Date: Fri, 15 Jan 2010 16:50
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2475 bytes
Hi Folks, Does anyone know of software or a web page that will take a Clustal .aln file and simply spew out a single consensus sequence? I have an alignment of thirty 2000bp nucleotide sequences and ideally want to simply stick a single letter consensus sequence into an isothermal primer design program. At the moment we are generating the consensus sequence by hand but it's a pain to do! Thanks Duncan -- I love deadlines. I especially like the whooshing noise they make as they go flying by. Duncan Clark GeneSys Ltd.
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