How to find scattered (non-tandem) repeats in DNA sequences?

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Article #2424

#2424

From: RY Bao
Date: Mon, 05 Apr 2010 19:54

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Hello Everybody,

I have a 2kb DNA sequence and would like to analyze the scattered repeats in it, which can be allowed with certain mismatches and may be separated by 1 to hundreds of base pairs. Is there a computer program or Web service available to perform this task ?

Greetings,
Sunny Bao (Wayne State University, US)

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Date: Mon, 5 Apr 2010 12:54:03 -0700 (PDT)
From: RY Bao <ry_bao@yahoo.com>
To: bio-soft@magpie.bio.indiana.edu
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subject: How to find scattered (non-tandem) repeats in DNA sequences?
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