[Bio-software] can't spawn "megablast

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Article #2573

#2573

From: S.S
Date: Wed, 03 Dec 2008 11:56

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2215 bytes

Hi,

I have been trying to run megablast on standalone through a perl code i've
written but i'm getting an error stating:

Can't spawn "megablast -d dm -i
D:/Data_eArray/E-Array/CGH_Projects/Drosophila/Chromosomes/chrUextra/chrUextra_query.txt
-o
D:/Data_eArray/E-Array/CGH_Projects/Drosophila/Chromosomes/chrUextra/chrUextra_BR.txt
-m 8": No error at BLAST.pl line 20." 

It does perform BLAST for some queries and then ends with the error. I have
tried running this code with other data, and it works with them.

Please help.

S.S
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From: "S.S" <sinhashruti.shruti@gmail.com>
Newsgroups: bionet.software
Subject: [Bio-software] can't spawn "megablast
Date: Wed, 3 Dec 2008 03:56:31 -0800 (PST)
Organization: BIOSCI/IUBio, Biology Dept., Indiana University
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