in silico ARDRA

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Article #2642

#2642

From: maryam didari
Date: Mon, 05 May 2008 12:49

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Dear all,
  I am working on  in silico ARDRA of a group of bacteria, i got the rDNA sequences from RDP ,but now i am confuse .
  At first i generated in silico patterns with software, and i want to compare pattern with each other to choose the best restriction enzymes from 11 enzymes that i have been used in in silico analysis.
  Now my problem is how compare these patterns and am i working and thinking true?
  Is it Ok to compare pattern in image format or it is better to compare them in the form of lenght of generated bands?
  Regards:
  Maryam

       
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From: maryam didari <didari_maryam@yahoo.com>
Newsgroups: bionet.software
Subject: in silico ARDRA
Date: Mon, 5 May 2008 05:49:53 -0700 (PDT)
Organization: BIOSCI/IUBio, Biology Dept., Indiana University
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