Re: [Bio-software] Which amino acid residue does the letter 'J' mean?

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Article #2650

#2650

From: Linlin Yan
Date: Thu, 26 Jun 2008 10:29

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Thank you for your answer.
I searched by google right now, and got the link from NCBI:
http://www.ncbi.nlm.nih.gov/IEB/ToolBox/C_DOC/lxr/source/data/BLOSUM50
There's a 'J' letter. I haven't found the explaination yet.

On Thu, Jun 26, 2008 at 1:35 PM, Aneesh Krishna
<krishna.aneesh@gmail.com> wrote:
> There is no 'J' in the scoring matrix that I found. Please go through the
> below link.
>
> http://stardec.ascc.neu.edu/~bba/CBIO3580/ALIGN/blosum50.txt
>
> Can u tell detail?
>
> On 6/25/08, Linlin Yan <yanlinlin82@gmail.com> wrote:
>>
>> I just found there is a letter 'J' in NCBI's scoring matrix file
>> (e.g. /usr/share/ncbi/data/BLOSUM50). Does anybody know what it is?
>> Thanks!
>>
>> _______________________________________________
>> Bio-soft mailing list
>> Bio-soft@net.bio.net
>> http://www.bio.net/biomail/listinfo/bio-soft
>
>
>
> --
> Aneesh.K
> Associate-Life Sciences
> Mascon Global Limited
> Delhi
> Mob: 09999061058

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From: "Linlin Yan" <yanlinlin82@gmail.com>
Newsgroups: bionet.software
Subject: Re: [Bio-software] Which amino acid residue does the letter 'J' mean?
Date: Thu, 26 Jun 2008 18:29:34 +0800
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