Article View: comp.archives
Article #2630[bionet...] fasta v1.5 fix
From: William R. Pearson
Date: Sun, 16 Dec 1990 18:39
Date: Sun, 16 Dec 1990 18:39
24 lines
1960 bytes
1960 bytes
Archive-name: bionet/molbio/fasta/1990-12-14 Archive: uvaarpa.virginia.edu:/public_access/fasta15.shar.Z [128.143.2.7] Original-posting-by: wrp@biochsn.acc.Virginia.EDU (William R. Pearson) Original-subject: fasta v1.5 fix Reposted-by: emv@ox.com (Edward Vielmetti) A new release of the fasta searching package - version 1.5 - has been available for downloading from the uvaarpa.virginia.EDU anonymous ftp host for several months. Yesterday a subtle bug in the software was reported that caused the program to core dump on rare occasions. I do not believe that the bug would have caused high-scoring sequences to be missed. This bug has been fixed, and version 1.5 users are encouraged to get the current version (1.5a) from uvaarpa.virginia.EDU. If you do not have internet access, I can send copies via electronic mail. Fasta1.4 does not have this bug (or any others that I know of). Version 1.5 offers several additional options for searching and for more flexible library handling. Version 1.4 is more mature, having been available with only minor modifications (to keep up with increasing library sizes) for almost two years. Bill Pearson
Technical Details
Message-ID:
<1990Dec16.183948.650@ox.com>Path:
arc1-ca.pugleaf.net!utzoo!utgpu!news-server.csri.toronto.edu!cs.utexas.edu!swrinde!zaphod.mps.ohio-state.edu!caen!ox.com!emvReferences:
<1990Dec14.030905.9291@murdoch.acc.Virginia.EDU>Show Full Headers
Complete Article Headers
Path: arc1-ca.pugleaf.net!utzoo!utgpu!news-server.csri.toronto.edu!cs.utexas.edu!swrinde!zaphod.mps.ohio-state.edu!caen!ox.com!emv From: wrp@biochsn.acc.Virginia.EDU (William R. Pearson) Newsgroups: comp.archives Subject: [bionet...] fasta v1.5 fix Keywords: fasta Message-ID: <1990Dec16.183948.650@ox.com> Date: 16 Dec 90 18:39:48 GMT References: <1990Dec14.030905.9291@murdoch.acc.Virginia.EDU> Sender: emv@ox.com (Edward Vielmetti) Reply-To: wrp@biochsn.acc.Virginia.EDU (William R. Pearson) Followup-To: bionet.software,bionet.molbio.genbank,bionet.molbio.pir,bionet.molbio.embldatabank Organization: University of Virginia Lines: 24 Approved: emv@ox.com (Edward Vielmetti) X-Original-Newsgroups: bionet.software,bionet.molbio.genbank,bionet.molbio.pir,bionet.molbio.embldatabank