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Article #5572

GENBANK Mail Server

#5572
From: Jack Chappelear
Date: Thu, 27 Oct 1988 13:46
59 lines
3110 bytes
The University of Houston Department of Biochemical and Biophysical Sciences
     and University Computing Center announce the availability of a
			GENBANK-SERVER

This is a mail response facility which will return a specific GenBank
entry requested via e-mail.  The request must specify one, and only one,
locus name (from the LOCUS line) from the GenBank sequence database.


The server can be accessed on the Internet and UUCP  *only* at this time.
Future connection through BITNET is possible.

Please be aware that a mail response program is not "smart" and can
only respond to a limited set of commands.  The full indexing of GenBank
(author, accession number, journal citation) are NOT available.

The address to use is
			genbank-server@uhnix2.uh.edu           (Internet)
or
			...uhnix2!genbank-server               (Usenet)

and your request can consist of one of the following:

HELP
SEND LOCUS genbank_locus_name_
SEND INDEX
SEND HELP (this may also work)

"HELP" will result in a small help file being sent back.

SEND LOCUS genbank_locus_name will return via e-mail the requested locus
if it exists, and an error message if it does not.  Index files are
available; ask for the master index via SEND INDEX and there will be more
information sent back.

Server Policies:

The server runs every half hour and will handle only *one* request at a
time.  If you want more than one entry, send in separate requests.
Large GenBank entries (Lambda, EBV, tobacco and liverwort chloroplasts)
may not make it through the thread of mailers.  UUCP mailers, in
particular, silently enforce a limit of 64,000 characters in a single
mail message.  Note also that Usenet mail is very unreliable; you should
consult the "pathalias" database to construct a mail path from
your machine to uhnix2.  A local Unix mail wizard may be able to help.

In the near future we will add access by accession number. It is
highly recommended that you get the help file, which explains the
version of GenBank being distributed and the update policy.

The server contains a simple response to someone asking for too many
loci or otherwise abusing the service: it stops working for them.
Please restrict your requests to no more than one or two a day; if
the demand is too great the service will randomly choose requests
to ignore, or will be stopped altogether.

Questions can be sent to dd@lanl.gov (Internet) or dd%lanl.gov@CUNYVM(BITNET).
Requests to talk to a human rather than a mail response program should
be sent to archive-managment@uhnix2.uh.edu.
Technical Details
Message-ID: <8809@spl1.UUCP>
Path: arc1-ca.pugleaf.net!utzoo!utgpu!watmath!clyde!mcdchg!motsj1!hplabs!sm.unisys.com!aero!elroy!spl1!ll1a!csdev!uunet!lll-winken!lll-tis!ames!mailrus!uflorida!novavax!proxftl!twwells!comparc

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Path: arc1-ca.pugleaf.net!utzoo!utgpu!watmath!clyde!mcdchg!motsj1!hplabs!sm.unisys.com!aero!elroy!spl1!ll1a!csdev!uunet!lll-winken!lll-tis!ames!mailrus!uflorida!novavax!proxftl!twwells!comparc
From: bchs16@uhnix2.uh.edu (Jack Chappelear)
Newsgroups: comp.archives
Subject: GENBANK Mail Server
Keywords: Database, Mail Server, Molecular Biology, Genetics
Message-ID: <8809@spl1.UUCP>
Date: 27 Oct 88 13:46:42 GMT
Sender: news@spl1.UUCP
Organization: University of Houston
Lines: 58
Approved: bill@twwells (T. William Wells)