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3 total messages Started by Katsuyuki Yamato Fri, 30 Oct 1992 01:20
How to extract a partial sequence from database?
#10
Author: Katsuyuki Yamato
Date: Fri, 30 Oct 1992 01:20
11 lines
1244 bytes
$@BgOB!w5~Bg%_%H%3%s%I%j20$G$9!#$$$D$bFI$`$@$1(J$@!??R$M$k$@$1$G$9!"!"!"(J

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$@It$N%7(J$@!<%1%s%9!"Nc$($P(J FEATURE TABLE $@$K5-=R$5$l$F$$$kNN0h$N0l$D!J%$%s(J
$@%H%m%sM-$j!?L5$7!K!"$"$k$$$O2?1v4pL\$+(J$@$i2?1v4pL\$^$G!"$rB>$N%"%W%j%1!<(J
$@%7%g%s$K$h$k2r@O$K;H$($k$h$&$J%U%)!<%^%C%H$GCj=P$7$F$/$l$kJXMx$J%=%U(J$@%H(J
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$@0dEA8&$K$O$J$$$h$&$G$9$N$G(J$@!"$h$m$7$/$*4j$$CW$7$^$9!#(J

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          $@Bg(J$@OB(J  $@>!9,(J        e53905@sakura.kudpc.kyoto-u.ac.jp
Re: How to extract a partial sequence from database?
#11
Author: Fumio Ike
Date: Fri, 30 Oct 1992 04:30
18 lines
1504 bytes
$BCS!wM}8&$G$9!#(B

In article <E53905.92Oct30102015@sakura.sakura.kudpc.kyoto-u.ac.jp> e53905@sakura.kudpc.kyoto-u.ac.jp (Katsuyuki Yamato) writes:
>$B#G#e#n#B#a#n#k$J$I$N%G!<%?%Y!<%9$+$i%(%s%H%j!<$r$R$$$F$-$F!"$=$NCf$N0l(B
>$BIt$N%7!<%1%s%9!"Nc$($P(B FEATURE TABLE $B$K5-=R$5$l$F$$$kNN0h$N0l$D!J%$%s(B
>$B%H%m%sM-$j!?L5$7!K!"$"$k$$$O2?1v4pL\$+$i2?1v4pL\$^$G!"$rB>$N%"%W%j%1!<(B
>$B%7%g%s$K$h$k2r@O$K;H$($k$h$&$J%U%)!<%^%C%H$GCj=P$7$F$/$l$kJXMx$J%=%U%H(B
>$B$O$J$$$G$7$g$&$+!)<+J,$G$O$=$s$J%W%m%0%i%`$rAH$a$=$&$K$b$J$$$G$9$7!"!"!"(B
>$B0dEA8&$K$O$J$$$h$&$G$9$N$G!"$h$m$7$/$*4j$$CW$7$^$9!#(B

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$B%G!<%?%Y!<%9$N%U%)!<%^%C%H$r0];}$7$?$^$^G$0U$N1v4pG[Ns!J#XHVL\$+$i#YHVL\!K(B
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$B!!!!!!!!!!!!!!!!!!CS!!0j@8!wM}2=3X8&5f=j!!F0J*!&:YK&%7%9%F%`8&5f<<(B
                                           fike@rkna50.riken.go.jp
                 TEL:048-462-1111(ext5042), FAX:048-462-4681(direct)
Re: How to extract a partial sequence from database?
#13
Author: Tanaka Hidetosi
Date: Fri, 30 Oct 1992 08:09
57 lines
3521 bytes
In article <E53905.92Oct30102015@sakura.sakura.kudpc.kyoto-u.ac.jp>
 e53905@sakura.kudpc.kyoto-u.ac.jp (Katsuyuki Yamato) writes:
 |$B#G#e#n#B#a#n#k$J$I$N%G!<%?%Y!<%9$+$i%(%s%H%j!<$r$R$$(B$B$F$-$F!"(B
 |$B$=$NCf$N0lIt$N%7!<%1%s%9$rB>$N%"%W%j%1!<%7%g%s$K$h$k2r@O$K(B
 |$B;H$($k$h$&$J%U%)!<%^%C%H$GCj=P(B$B$7$F$/$l$kJXMx$J%=%U%H$O(B
 |$B$J$$$G$7$g$&$+!)(B

$B$"$H$O!"(BEntrez (NIH $B$N(BCDROM) $B$+(B GeneWorks (IntelliGenetics$B!"9b2A!*(B)
$B$"$?$j$GBLL\$J$i!"$J$$$+$b!#(B $B0J2<$OC1$J$k4XO"%3%a%s%H$G$9(B(_ _)

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join(1..123, 135..200, 250..300)
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$B0J2<$O(B GenBank $B$NCf(B$B$G$bLLE]$JNc!JH4?h!K!#(B
$BC1$K$/$C$D$1$k$@$1$@$1$IB>$N%(%s%H%j$r;2>H$7$F$k$N$,LLE]!#(B

     CDS             join(M68998:1341..1385,M68999:39..108,M81617:1..20,
                     M81618:1..21,M68974:363..413,M68975:200..235,
                     M68976:24..50,M68977:80..106,M68978:183..209,
                     M68979:30..56,M68988:11..37,M68989:356..412,M68980:6..71,
                     M68990:11..118,M68981:61..87,M68982:12..47,M68983:26..70,
                     M68984:92..124,M68985:11..37,M68986:59..112,
                     M68987:23..109,M68991:11..64,M68992:1..45,M68993:11..79,
                     M68994:11..34,M68995:11..73,M68996:1..42,M68997:11..163,
                     M69000:149..193,M69010:16..57,M69007:16..42,M69006:16..96,
                     M69005:186..221,M69004:16..69,M69003:1..54,M69002:16..51,
                     M69001:16..102,M69009:16..54,16..18)
                     /note="This is not a complete cds. Exons 3 and 4 were
                     missing from the submitted data therefore GenBank had to
                     get the incomplete exons from the published citation (Fig.
                     2)."
                     /product="alpha-1 type XIII collagen"

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(2)
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======  $BEDCf=(=S!w#I#C#O#T(B
$B!!!!!!!!(Bhtanaka@icot.or.jp
$B!!!!!!!!(BGBA01223 (NIFTY)   ======
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