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Article #36Re: Bug [or feature?] in BMDP 4F
From: M. Bickis
Date: Fri, 30 Oct 1992 20:51
Date: Fri, 30 Oct 1992 20:51
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2276 bytes
In article <1992Oct30.120219.480@hnrc.tufts.edu> jerry@hnrc.tufts.edu (Jerry Dallal) writes in reply to me: >> I was analyzing a large but somewhat sparse contingency >> table on BMDP 4F. I noticed, almost by accident, that the program was >> not calculating the degrees-of-freedom for some log-linear models correctly. >> [ ... ] >> "We recommend that you add a constant to all cells when you have empty >> cells in your data that are not to be treated as structural zeros. >> Otherwise, some of the analyses ARE NOT PERFORMED CORRECTLY." > >Let's be fair. This is not an easy problem. The correct number of degrees of >freedom depends not only on the pattern of structural zeros, but on the model >being fitted to them. I don't dispute that finding degrees of freedom for a complicated model with structural zeros is non-trivial. My point was that in this table I was *not* assuming any structural zeros. For a complete table, the df depend *only* on the model and not on any pattern of *observed* zeros. BMDP 4F has a feature for identifying structural zeros which I had not invoked. If the program was arbitrarily assuming that observed zeros were structural, at the very least it should have printed out a message to that effect. >>>>>>>>>>>>>>>>>>>bickis@math.usask.ca<<<<<<<<<<<<<<<<<<<<<<<<<<< Mik Bickis \,,, .*#*. \ University of Saskatchewan Department of \,,, ^\\|//^ ```\ Saskatoon, Saskatchewan Mathematics & Statistics \ )|( ```\ Canada S7N 0W0 <<<<<<<<<<<<<<<<<<<S|A|S|K|A|T|C|H|E|W|A|N|>>>>>>>>>>>>>>>>>>>>>>>
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Path: arc1-ca.pugleaf.net!sparky!uunet!seismo!news.bbn.com!usc!zaphod.mps.ohio-state.edu!cs.utexas.edu!sdd.hp.com!wupost!gumby!destroyer!cs.ubc.ca!unixg.ubc.ca!kakwa.ucs.ualberta.ca!access.usask.ca!skmath3!bickis From: bickis@skmath3 (M. Bickis) Newsgroups: sci.math.stat Subject: Re: Bug [or feature?] in BMDP 4F Message-ID: <1992Oct30.205117.22832@access.usask.ca> Date: 30 Oct 92 20:51:17 GMT References: <1992Oct29.223353.887@access.usask.ca> <1992Oct30.120219.480@hnrc.tufts.edu> Sender: news@access.usask.ca (USENET News System) Organization: University of Saskatchewan, Saskatoon, Canada Lines: 30 Nntp-Posting-Host: skmath3.usask.ca