Article View: sci.techniques.xtallography
Article #78Capping groups in CNS
From: Alain Laederach
Date: Fri, 10 Nov 2000 00:00
Date: Fri, 10 Nov 2000 00:00
37 lines
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1889 bytes
--------------128271B3745913EF41B9FDA6 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: 7bit Hi, Has anyone tried to make all atom peptides with capping groups in CNS 1.0? If so, did you run into the problem of missing parameters, that is the topology and param file not being compatible? When I try and patch a C terminal cap (CTN) I am missing an angle and an improper, angle, using the default all atom param and topology files. Thanks for any help, Alain Laederach --------------128271B3745913EF41B9FDA6 Content-Type: text/html; charset=us-ascii Content-Transfer-Encoding: 7bit <!doctype html public "-//w3c//dtd html 4.0 transitional//en"> <html> Hi, <p>Has anyone tried to make all atom peptides with capping groups in CNS 1.0? If so, did you run into the problem of missing parameters, that is the topology and param file not being compatible? When I try and patch a C terminal cap (CTN) I am missing an angle and an improper, angle, using the default all atom param and topology files. <p>Thanks for any help, <p>Alain Laederach <pre></pre> </html> --------------128271B3745913EF41B9FDA6--
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X-Google-Language: ENGLISH,ASCII-7-bit X-Google-Thread: 10099c,434a148946c278a8,start X-Google-Attributes: gid10099c,public X-Google-Thread: fcf0b,434a148946c278a8,start X-Google-Attributes: gidfcf0b,public X-Google-Thread: f804b,434a148946c278a8,start X-Google-Attributes: gidf804b,public From: Alain Laederach <alain@iastate.edu> Subject: Capping groups in CNS Date: 2000/11/10 Message-ID: <3A0C0DDD.895F7841@iastate.edu> X-Deja-AN: 692046131 X-Accept-Language: en Content-Type: multipart/alternative; boundary="------------128271B3745913EF41B9FDA6" Organization: Iowa State University Mime-Version: 1.0 Newsgroups: sci.techniques.xtallography,bionet.software.xplor,bionet.xtallography