Article View: bionet.software.acedb
Article #25Re: tag does not fit model error 4.9t
From: Ed Griffiths
Date: Wed, 02 Feb 2005 09:14
Date: Wed, 02 Feb 2005 09:14
48 lines
3541 bytes
3541 bytes
Mark, Several users reported this, if you update to 4.9v you should find the problem has gone away, sorry for the inconvenience. In point 3) you mention that the files don't read in automatically any more, can you just clarify what files/ where they are etc etc Ed > I'm experiencing a peculiarity that has me a bit befuddled. I did the > following: > > 1) I have a models.wrm and a bunch of .ace files generated from a dump > of the associated database. > 2) I start up ACE (4.9t) and initiatlize a new database with this > models.wrm file. > 3) I start to read in the ACE files (b.t.w. why don't they all read in > one after another like they used to?) > 4) I get an error in my Protein class saying that tag DNA_homol does > not fit model. > 5) I look at the offending line in the .ace file and it is simply > > Protein : xxxx > DNA_homol yyyy > > 6) I look at what is loaded into the database, and it has in fact been > written into the DB! > 7) I open the "offending" Protein record, and make a dump of *just* > that record. > 8) I look at the two .ace files side by side and they are 100% identical. > > How can it be that Ace can read in a record, claim that there is an > error, read it in regardless, and then dump out exactly the same > "erroneous" record? you'll have to trust me that the error message is > incorrect,and that DNA_homol is, in fact, a valid tag in the model :-) -- ------------------------------------------------------------------------ | Ed Griffiths, Acedb development, Informatics Group, | | Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, | | Hinxton, Cambridge CB10 1SA, UK | | | | email: edgrif@sanger.ac.uk Tel: +44-1223-494780 Fax: +44-1223-494919 | ------------------------------------------------------------------------
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X-Google-Thread: f6d40,4087404380c3f8f8 X-Google-Attributes: gidf6d40,public X-Google-Language: ENGLISH,ASCII-7-bit Path: arc1-ca.pugleaf.net!g2news1.google.com!news1.google.com!proxad.net!proxad.net!213.253.16.105.MISMATCH!mephistopheles.news.clara.net!news.clara.net!valentin.news.clara.net!193.60.199.18.MISMATCH!feed2.jnfs.ja.net!jnfs.ja.net!rfcgr.mrc.ac.uk!hgmp.mrc.ac.uk!net.bio.net From: Ed Griffiths <edgrif@sanger.ac.uk> Newsgroups: bionet.software.acedb Subject: Re: tag does not fit model error 4.9t Date: 2 Feb 2005 09:14:15 -0000 Organization: Sanger Institute Lines: 49 Sender: mod-ace@rfcgr.mrc.ac.uk Approved: BIOSCI Approval Key <biosci-approval-key@net.bio.net> Message-ID: <ctq5kp$t1p$1@helium.hgmp.mrc.ac.uk> References: <41FF8D48.2060308@illuminae.com> NNTP-Posting-Host: mercury.hgmp.mrc.ac.uk Mime-Version: 1.0 Content-Type: text/plain; charset=us-ascii; format=flowed Content-Transfer-Encoding: 7bit X-Trace: helium.hgmp.mrc.ac.uk 1107335655 29887 193.62.192.80 (2 Feb 2005 09:14:15 GMT) X-Complaints-To: news@net.bio.net NNTP-Posting-Date: Wed, 2 Feb 2005 09:14:15 +0000 (UTC) X-Original-To: bionet-software-acedb@net.bio.net User-Agent: Mozilla/5.0 (X11; U; OSF1 alpha; en-US; rv:1.4) Gecko/20030903 X-Accept-Language: en, en-us X-Auth: PGPMoose V1.1 PGP bionet.software.acedb iQCVAwUAQgCZ5qCIqsWvyF5FAQGdPgQArV0hHSNtn7zP43erNQX5hHIsCFvzWY1v zQcjhCH8r9M5jGBQyx0VE0ZLvX0xOfOifzfY0N2ZcktlJwhJ5rUtlkTsGZo91M+5 q6oIn+GyPbwR0NFZWGWDd978tKRPDLdHNDqJVEZjj4xVMdgB2zjCxa1BPFUcIFdI ld1hpnmGQcw= =jLqf