🚀 go-pugleaf

RetroBBS NetNews Server

Inspired by RockSolid Light RIP Retro Guy

Article View: bionet.software
Article #2342

Unipro UGENE v1.6 is released

#2342
From: Mikhail Fursov
Date: Thu, 24 Dec 2009 06:16
28 lines
4124 bytes
Unipro UGENE is a free open source multiplatform software tool for
molecular biologists.

Version 1.6 new plugins:

   * Phylip plugin for building phylogenetic trees. Based on original
Phylip 3.6 package .
         o Neighbor Joining algorithm;
         o Phylogenetic trees visualization;
         o Integration with Multiple Alignment Editor.

   * Distributed computing in UGENE
         o Support for launching HMMER 3, Smith-Waterman, MUSCLE
tasks on remote machines.
         o Remote tasks support;

New features and bug fixes:

   * Search for tandem repeats added introduced in Repeat Finder
plugin;
   * Project files transferability support;
   * "Export project" feature;
   * Remote databases interaction: NCBI, PDB, Swiss Prot;
   * BioStruct3D plugin: anaglyph stereo mode;
   * and a lot more...

Prebuilt packages for different platforms and complete source code is
available here: http://ugene.unipro.ru/download.html
Technical Details
Message-ID: <mailman.21.1261661289.27757.bio-soft@net.bio.net>
Path: arc1-ca.pugleaf.net!g2news1.google.com!news3.google.com!news1.google.com!npeer01.iad.highwinds-media.com!news.highwinds-media.com!feed-me.highwinds-media.com!news.glorb.com!news2.glorb.com!xmission!elk.ncren.net!news.purdue.edu!m25g2000yqc.googlegroups.com!not-for-mail

Show Full Headers
Complete Article Headers
X-Google-Thread: 6710630482,1e3ce225d9942df1,start
X-Google-Attributes: gid6710630482,public,usenet
X-Google-NewGroupId: yes
X-Google-Language: ENGLISH,ASCII-7-bit
Path: arc1-ca.pugleaf.net!g2news1.google.com!news3.google.com!news1.google.com!npeer01.iad.highwinds-media.com!news.highwinds-media.com!feed-me.highwinds-media.com!news.glorb.com!news2.glorb.com!xmission!elk.ncren.net!news.purdue.edu!m25g2000yqc.googlegroups.com!not-for-mail
From: Mikhail Fursov <mike.fursov@gmail.com>
Newsgroups: bionet.software
Subject: Unipro UGENE v1.6 is released
Date: Wed, 23 Dec 2009 22:16:17 -0800 (PST)
Organization: http://groups.google.com
Lines: 29
Approved: BIOSCI Approval Key <biosci-approval-key@net.bio.net>
Message-ID: <mailman.21.1261661289.27757.bio-soft@net.bio.net>
NNTP-Posting-Host: kalo.bio.indiana.edu
Mime-Version: 1.0
Content-Type: text/plain; charset=ISO-8859-1
X-Trace: mailhub227.itcs.purdue.edu 1261661319 25170 129.79.224.26 (24 Dec 2009 13:28:39 GMT)
X-Complaints-To: news@purdue.edu
NNTP-Posting-Date: Thu, 24 Dec 2009 13:28:39 +0000 (UTC)
To: bionet-software@moderators.isc.org
X-Envelope-From: news@google.com
DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=gamma;
 h=domainkey-signature:received:received:received
 :x-authentication-warning:to:path:from:newsgroups:subject:date
 :organization:lines:message-id:nntp-posting-host:mime-version
 :content-type:x-trace:x-complaints-to:nntp-posting-date
 :complaints-to:injection-info:user-agent:x-http-via:x-http-useragent;
 bh=EXJPGPx7Mil1MT6PoXPuCltqtIQXvSW+w2HJ2ZNGVUs=;
 b=NymWOHcV9mPuaLEm3zWBmOtYCaEEY1kQCvJTnprYEaFIoKi7IP8tRIj3OZnPJoWTL+
 QJ1jOVIFrlRDGIEflMu3NveDmwX1GRnxMjOs4Hw0suQO7XL1SkLV5T6T87OPbFOKf+E+
 rnNkHmMxS2xMvFYZ8q0hpYZNdk6Dblsp5F0Bc=
DomainKey-Signature: a=rsa-sha1; c=nofws; d=gmail.com; s=gamma;
 h=x-authentication-warning:to:path:from:newsgroups:subject:date
 :organization:lines:message-id:nntp-posting-host:mime-version
 :content-type:x-trace:x-complaints-to:nntp-posting-date
 :complaints-to:injection-info:user-agent:x-http-via:x-http-useragent;
 b=CibP9eiprHKidHJjhabSoT/XizlagRZzmhOmqB0GEGYdwUeIalBNa5MA4LRANRPLRi
 3ZXnVymDF+zBzaM3a/hjGJLZJdH9Q7F43DWfqNZ8ZOgnD5//jaX4PTmFdELBN2lTenVo
 raqsdSucWXKsSgV6YS9qDCTDlyBE0URSRc+BM=
X-Authentication-Warning: yws13.prod.google.com: news set sender to
 news@google.com using -f
Complaints-To: groups-abuse@google.com
Injection-Info: m25g2000yqc.googlegroups.com; posting-host=212.17.10.114; 
 posting-account=GUh41QoAAAC2bcZAU6oyL7TynOgTtusR
User-Agent: G2/1.0
X-HTTP-Via: 1.1 rio2.unipro.ru:8080 (squid/2.7.STABLE5)
X-HTTP-UserAgent: Mozilla/5.0 (Windows; U; Windows NT 5.1; en-GB; rv:1.9.1.6) 
 Gecko/20091201 Firefox/3.5.6 (.NET CLR 3.5.30729), gzip(gfe),
 gzip(gfe)
X-Mailman-Approved-At: Thu, 24 Dec 2009 08:27:36 -0500
X-BeenThere: bio-soft@net.bio.net
X-Mailman-Version: 2.1.4
Precedence: list
X-Auth: PGPMoose V1.1 PGP bionet.software
 iQCVAwUBSzNsaaCIqsWvyF5FAQGJ0QQAphvApXWF3iJdag0gtRbwAXI5Xmo5aXmD
 TFU7bprZif0VRZDQrxBDi59fUcna7L5Qhuw4cWBLzV/u1BzXM2yufgppfd1auO5W
 XgaT33Yn7Nr6V/fDKFw3OGlYX5nMBBohsC+BRwDUudSOLaD9t5vg+Iu4a/uFPCud
 wFYaFhNuylo= =Cg3k