Article View: bionet.software
Article #2406Enquiry about fold change calculation
From: chunnu
Date: Tue, 16 Feb 2010 06:27
Date: Tue, 16 Feb 2010 06:27
7 lines
3593 bytes
3593 bytes
Hi there, i am a newbie in micro array analysis field. i have log transformed normalized data. For two sample e.g. normal vs tumor. Now I wanna check that what number of gene are up- or down regulated in this set. Would anyone like to tell me the best way to do that. regards samjay
Technical Details
Message-ID:
<mailman.100.1266328734.25217.bio-soft@net.bio.net>Path:
arc1-ca.pugleaf.net!g2news1.google.com!news2.google.com!Xl.tags.giganews.com!border1.nntp.dca.giganews.com!nntp.giganews.com!local2.nntp.dca.giganews.com!news.giganews.com.POSTED!not-for-mailShow Full Headers
Complete Article Headers
X-Google-Thread: 6710630482,d9fbb7b24c1f98,start X-Google-Attributes: gid6710630482,public,usenet X-Google-NewGroupId: yes X-Google-Language: ENGLISH,ASCII-7-bit Path: arc1-ca.pugleaf.net!g2news1.google.com!news2.google.com!Xl.tags.giganews.com!border1.nntp.dca.giganews.com!nntp.giganews.com!local2.nntp.dca.giganews.com!news.giganews.com.POSTED!not-for-mail NNTP-Posting-Date: Tue, 16 Feb 2010 07:59:19 -0600 X-Envelope-From: news@google.com DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=gamma; h=domainkey-signature:received:received:received :x-authentication-warning:to:path:from:newsgroups:subject:date :organization:lines:message-id:nntp-posting-host:mime-version :content-type:x-trace:x-complaints-to:nntp-posting-date :complaints-to:injection-info:user-agent:x-http-useragent; bh=IkCX/H+woFhJ3vj0zRofagVX9WCdSSxICMyVsOhQH+I=; b=dqGzUG3Uc2HJbpul4n5JZKIn/EycytdsEk3B+UD7UjPMUNgp5vDDNNql88HzTJ0lb1 95AYk/jJs0iiKSqzjq+5O2mpZJJ4AnuH8ru6wHSdSYl6uMmfhd9N1zaLfHOtnzyJ4Tm8 yAPj7OE5hSUNSzs47blwU3MbrJFBDL1jTXDXs= DomainKey-Signature: a=rsa-sha1; c=nofws; d=gmail.com; s=gamma; h=x-authentication-warning:to:path:from:newsgroups:subject:date :organization:lines:message-id:nntp-posting-host:mime-version :content-type:x-trace:x-complaints-to:nntp-posting-date :complaints-to:injection-info:user-agent:x-http-useragent; b=twgZOWeIEJs0AIf489KLOFzYTNcFiXLIZJMd8/kSCrUoIH3LgPCoAPsGsfCFxHHL6q 9H7PZwm4MAfen+FvNrA8ZGejN4nCuXFSFmELZzN3S5fOVvuydz0qejo+i0NhDIzkuwy5 RR2XmkJ2RHtGLIn1hEqwuXDR0CPvsOWrGbMl4= X-Authentication-Warning: ywd9.prod.google.com: news set sender to news@google.com using -f To: bionet-software@moderators.isc.org From: chunnu <sanjaysingh765@gmail.com> Date: Mon, 15 Feb 2010 22:27:16 -0800 (PST) Organization: http://groups.google.com Mime-Version: 1.0 Content-Type: text/plain; charset=ISO-8859-1 Complaints-To: groups-abuse@google.com Injection-Info: b1g2000prc.googlegroups.com; posting-host=202.141.148.67; posting-account=gikdJQoAAACOAITRPox9kDZKeIp2jAQW User-Agent: G2/1.0 X-HTTP-UserAgent: Mozilla/5.0 (Windows; U; Windows NT 5.1; en-US; rv:1.9.0.5) Gecko/2008120122 Firefox/3.0.5,gzip(gfe),gzip(gfe) X-Mailman-Approved-At: Tue, 16 Feb 2010 08:58:52 -0500 X-BeenThere: bio-soft@net.bio.net X-Mailman-Version: 2.1.4 Precedence: list subject: Enquiry about fold change calculation Newsgroups: bionet.software Message-ID: <mailman.100.1266328734.25217.bio-soft@net.bio.net> Approved: BIOSCI Approval Key <biosci-approval-key@net.bio.net> X-Auth: PGPMoose V1.1 PGP bionet.software iQCVAwUBS3qkn6CIqsWvyF5FAQG+4wQAwROu7dgkCNzZdAHKexoxJM7TUH/ui9Tu W6i8B0Enci/s9xrbMdlm5dMjy12rKlD9QXZERLkpw5jbQ9Gw1iG4gg5KuWcr76Us 2uEimRoz8bXLGPSAy4mBLy+HD9psrLc5QAjnrK2kS5wW+su2+vafFPgZQrK7aZaS BiLZtwt+fZM= =ewkF Lines: 8 X-Usenet-Provider: http://www.giganews.com X-Trace: sv3-rUAV/V4W5cJ4Abqdmeu6UyYwKKRZKTTQp/5DSYcBxbZiy/qCEwvUo13ja533HUQt2Byl47O99D+Ryna!14lV9097FI1TpzIu9U+BLFveTAoQdCYD4p0IjCtSvkRHEQAlqV+p3rAlC/B+wND42d7xU1lwrxig!ykvD X-Complaints-To: abuse@giganews.com X-DMCA-Notifications: http://www.giganews.com/info/dmca.html X-Abuse-and-DMCA-Info: Please be sure to forward a copy of ALL headers X-Abuse-and-DMCA-Info: Otherwise we will be unable to process your complaint properly X-Postfilter: 1.3.40