Capping groups in CNS

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1 total messages Started by Alain Laederach Fri, 10 Nov 2000 00:00

#78

Author: Alain Laederach
Date: Fri, 10 Nov 2000 00:00

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Hi,

Has anyone tried to make all atom peptides with capping groups in CNS
1.0? If so, did you run into the problem of missing parameters, that is
the topology and param file not being compatible? When I try and patch a
C terminal cap (CTN) I am missing an angle and an improper, angle, using
the default all atom param and topology files.

Thanks for any help,

Alain Laederach



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<!doctype html public "-//w3c//dtd html 4.0 transitional//en">
<html>
Hi,
<p>Has anyone tried to make all atom peptides with capping groups in CNS
1.0? If so, did you run into the problem of missing parameters, that is
the topology and param file not being compatible? When I&nbsp;try and patch
a C terminal cap (CTN) I&nbsp;am missing an angle and an improper, angle,
using the default all atom param and topology files.
<p>Thanks for any help,
<p>Alain Laederach
<pre></pre>
&nbsp;</html>

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