tag does not fit model error 4.9t

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2 total messages Started by Mark Wilkinson Wed, 02 Feb 2005 09:08

#24

Author: Mark Wilkinson
Date: Wed, 02 Feb 2005 09:08

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Hi all!

Yes, I'm still kicking around with AceDB :-)

I'm experiencing a peculiarity that has me a bit befuddled.  I did the 
following:

1)  I have a models.wrm and a bunch of .ace files generated from a dump 
of  the associated database.
2)  I start up ACE  (4.9t) and initiatlize a new database with this 
models.wrm file.
3)  I start to read in the ACE files (b.t.w. why don't they all read in 
one after another like they used to?)
4)  I get an error in my Protein class saying that tag DNA_homol does 
not fit model.
5)  I look at the offending line in the .ace file and it is simply

Protein : xxxx
DNA_homol  yyyy

6)  I look at what is loaded into the database, and it has in fact been 
written into the DB!
7)  I open the "offending" Protein record, and make a dump of *just* 
that record.
8)  I look at the two .ace files side by side and they are 100% identical.

How can it be that Ace can read in a record, claim that there is an 
error, read it in regardless, and then dump out exactly the same 
"erroneous" record?  you'll have to trust me that the error message is 
incorrect,and that DNA_homol is, in fact, a valid tag in the model :-)

Any advice is welcome!!

Cheers all!

Mark




---

Re: tag does not fit model error 4.9t

#25

Author: Ed Griffiths
Date: Wed, 02 Feb 2005 09:14

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Mark,

Several users reported this, if you update to 4.9v you should find the problem 
has gone away, sorry for the inconvenience.

In point 3) you mention that the files don't read in automatically any more, can 
you just clarify what files/ where they are etc etc

Ed


> I'm experiencing a peculiarity that has me a bit befuddled.  I did the 
> following:
> 
> 1)  I have a models.wrm and a bunch of .ace files generated from a dump 
> of  the associated database.
> 2)  I start up ACE  (4.9t) and initiatlize a new database with this 
> models.wrm file.
> 3)  I start to read in the ACE files (b.t.w. why don't they all read in 
> one after another like they used to?)
> 4)  I get an error in my Protein class saying that tag DNA_homol does 
> not fit model.
> 5)  I look at the offending line in the .ace file and it is simply
> 
> Protein : xxxx
> DNA_homol  yyyy
> 
> 6)  I look at what is loaded into the database, and it has in fact been 
> written into the DB!
> 7)  I open the "offending" Protein record, and make a dump of *just* 
> that record.
> 8)  I look at the two .ace files side by side and they are 100% identical.
> 
> How can it be that Ace can read in a record, claim that there is an 
> error, read it in regardless, and then dump out exactly the same 
> "erroneous" record?  you'll have to trust me that the error message is 
> incorrect,and that DNA_homol is, in fact, a valid tag in the model :-)



-- 
  ------------------------------------------------------------------------
| Ed Griffiths, Acedb development, Informatics Group,                    |
|        Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus,  |
|               Hinxton, Cambridge CB10 1SA, UK                          |
|                                                                        |
| email: edgrif@sanger.ac.uk  Tel: +44-1223-494780  Fax: +44-1223-494919 |
  ------------------------------------------------------------------------

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